Swate template MetaboLights - Chromatography
Metabolomics, metabolite, Chromatography
v1.0.5 released on 07/02/2025
48 Downloads
Template Content
Building Blocks + example values
| Input [Sample Name] | Protocol Type | Term Source REF (DPBO:1000161) | Term Accession Number (DPBO:1000161) | Parameter [solvent extraction] | Term Source REF (CHMO:0001598) | Term Accession Number (CHMO:0001598) | Parameter [derivatisation] | Term Source REF (CHMO:0001485) | Term Accession Number (CHMO:0001485) | Component [chromatography instrument] | Term Source REF (OBI:0000485) | Term Accession Number (OBI:0000485) | Component [chromatography autosampler model] | Term Source REF (DPBO:0000047) | Term Accession Number (DPBO:0000047) | Component [chromatography column model] | Term Source REF (DPBO:0000048) | Term Accession Number (DPBO:0000048) | Parameter [chromatography column type] | Term Source REF (DPBO:0000053) | Term Accession Number (DPBO:0000053) | Component [chromatography guard column model] | Term Source REF (DPBO:0000049) | Term Accession Number (DPBO:0000049) | Parameter [label] | Term Source REF (CHEBI:35209) | Term Accession Number (CHEBI:35209) | Output [Data] | Data Format | Data Selector Format |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gas Chromatography | NCIT | https://bioregistry.io/NCIT:C30014 | 2 ml ethyl acetate | trimethylsilyl derivatisation | CHMO | http://purl.obolibrary.org/obo/CHMO_0002758 | Shimadzu GCMS-QP2010 Ultra | GCMS-TQ series multifunctional autosampler AOC-6000 | Zebron ZB-AAA GC(10 m x 0.25 mm; Phenomenex) | medium polarity | SH-IP Guard Column | 13C |