Swate template Imaging sample
v2.0.0 released on 01/01/0001
by Ksenia Krooß, Sabrina Zander, Stella Eggels
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Protocol REF | Characteristic [organism] | Term Source REF (OBI:0100026) | Term Accession Number (OBI:0100026) | Characteristic [Infraspecific name] | Term Source REF (MIAPPE:0044) | Term Accession Number (MIAPPE:0044) | Characteristic [cell type] | Term Source REF (EFO:0000324) | Term Accession Number (EFO:0000324) | Characteristic [Biological material ID] | Term Source REF (MIAPPE:0040) | Term Accession Number (MIAPPE:0040) | Characteristic [Genotype] | Term Source REF (NCIT:C16631) | Term Accession Number (NCIT:C16631) | Characteristic [Plasmid] | Term Source REF (NCIT:C754) | Term Accession Number (NCIT:C754) | Parameter [chemical treatment] | Term Source REF (EO:0007189) | Term Accession Number (EO:0007189) | Parameter [Experimental factor] | Term Source REF (MIAPPE:0060) | Term Accession Number (MIAPPE:0060) | Characteristic [sample role] | Term Source REF (AFRL:0000035) | Term Accession Number (AFRL:0000035) | Characteristic [target compartment] | Term Source REF (DPBO:1000121) | Term Accession Number (DPBO:1000121) | Characteristic [imaging signal mechanism] | Term Source REF (DPBO:0000122) | Term Accession Number (DPBO:0000122) | Characteristic [imaging signal molecule] | Term Source REF (DPBO:0000123) | Term Accession Number (DPBO:0000123) | Characteristic [target molecule] | Term Source REF (SHARELOC:000006) | Term Accession Number (SHARELOC:000006) | Output [Sample Name] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Arabidopsis thaliana | NCBITAXON | http://purl.obolibrary.org/obo/NCBITAXON_3702 | Col-0 | EFO | https://bioregistry.io/EFO:0005148 | leaf pavement cell | PO | https://www.ebi.ac.uk/ols4/ontologies/po/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FPO_0025212 | wild type | NCIT | https://bioregistry.io/NCIT:C62195 | abscisic acid treatment | EO | http://purl.obolibrary.org/obo/EO_0007105 | drought | ENVO | https://bioregistry.io/ENVO:1000745 | control | EFO | https://bioregistry.io/EFO:0001461 | cytoplasm | GO | https://bioregistry.io/GO:0005737 | fluorescent protein | green fluorescent protein | actin filament | GO | https://bioregistry.io/GO:0005884 |