Swate template ENA - Raw sequencing reads
mandatory, Sequencing Data, Genomics, Transcriptomics
v1.0.5 released on 01/01/0001
by Stella Eggels, Xiaoran Zhou
145 Downloads
Template Content
Building Blocks + example values
| Input [Sample Name] | Component [next generation sequencing instrument model] | Term Source REF (DPBO:0000040) | Term Accession Number (DPBO:0000040) | Characteristic [Sequencing Library Name] | Term Source REF (NCIT:C182058) | Term Accession Number (NCIT:C182058) | Characteristic [library source] | Term Source REF (GENEPIO:0001965) | Term Accession Number (GENEPIO:0001965) | Parameter [Library selection] | Term Source REF (GENEPIO:0001940) | Term Accession Number (GENEPIO:0001940) | Parameter [library strategy] | Term Source REF (GENEPIO:0001973) | Term Accession Number (GENEPIO:0001973) | Parameter [library layout] | Term Source REF (DPBO:0000015) | Term Accession Number (DPBO:0000015) | Characteristic [MD5 Checksum] | Term Source REF (NCIT:C171276) | Term Accession Number (NCIT:C171276) | Output [Data] | Data Format | Data Selector Format |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Illumina HiSeq 1500 | GENEPIO | http://purl.obolibrary.org/obo/GENEPIO_0100115 | genomic source | GENEPIO | http://purl.obolibrary.org/obo/GENEPIO_0001966 | PCR method | GENEPIO | http://purl.obolibrary.org/obo/GENEPIO_0001955 | Whole Genome Sequencing | NCIT | https://bioregistry.io/NCIT:C101294 | single-end | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000086 |