Swate template Public genomic resources
Genomics, Genome, resource, Publication
v1.0.0 released on 01/22/2026
by Stefan Kusch, Stella Eggels
12 Downloads
Template Content
Building Blocks + example values
| Input [Sample Name] | Characteristic [NCBI genome accession] | Term Source REF (EDAM:2787) | Term Accession Number (EDAM:2787) | Characteristic [Organism] | Term Source REF (NCIT:C14250) | Term Accession Number (NCIT:C14250) | Characteristic [NCBI Taxonomy Identifier] | Term Source REF (NCIT:C179773) | Term Accession Number (NCIT:C179773) | Characteristic [strain] | Term Source REF (EFO:0005135) | Term Accession Number (EFO:0005135) | Component [next generation sequencing instrument model] | Term Source REF (DPBO:0000040) | Term Accession Number (DPBO:0000040) | Component [assembly software] | Term Source REF (DPBO:1000234) | Term Accession Number (DPBO:1000234) | Characteristic [assembly genome size] | Unit | Term Source REF (GENEPIO:0001561) | Term Accession Number (GENEPIO:0001561) | Characteristic [contig count] | Term Source REF (GENEPIO:0000093) | Term Accession Number (GENEPIO:0000093) | Characteristic [contig N50] | Unit | Term Source REF (OBI:0001941) | Term Accession Number (OBI:0001941) | Characteristic [Publication Year] | Term Source REF (NCIT:C183340) | Term Accession Number (NCIT:C183340) | Characteristic [digital object identifier] | Term Source REF (OBI:0002110) | Term Accession Number (OBI:0002110) | Output [Data] | Data Format | Data Selector Format |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GCA_025991245.1 | Galdieria partita | NCBITAXON | http://purl.obolibrary.org/obo/NCBITAXON_83374 | 83374 | NBRC 102759 | PacBio Sequel | OBI | https://bioregistry.io/OBI:0002632 | Canu v. 2.0; Racon v. 1.4.17; Pilon v. 1.2.3 | 17.8 | mega base pair | UO | https://bioregistry.io/UO:0000329 | 80 | 225.5 | kilo base pair | UO | https://bioregistry.io/UO:0000328 | 2022 | https://doi.org/10.1073/pnas.2210665119 |
Release Notes
Currently Work in Progress 🚧Versions
| Version | Name | Release on |
| 1.0.0 | Public genomic resources | 01/22/2026 |