Swate template Imaging computation
imaging, Computation, Analysis
v2.0.0 released on 01/01/0001
by Christine Rempfer, Ksenia Krooß, Sabrina Zander, Stella Eggels
145 Downloads
Template Content
Building Blocks + example values
| Input [Data] | Data Format | Data Selector Format | Parameter [image processing technique] | Term Source REF (ERO:0001788) | Term Accession Number (ERO:0001788) | Component [image processing software] | Term Source REF (DPBO:1000128) | Term Accession Number (DPBO:1000128) | Parameter [data analysis] | Term Source REF (SIO:001051) | Term Accession Number (SIO:001051) | Component [image data analysis software] | Term Source REF (DPBO:1000129) | Term Accession Number (DPBO:1000129) | Output [Data] | Data Format | Data Selector Format |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| export as tiff | Zeiss ZEN 3.5 (blue edition) | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_1000195 | Segmentation and watershed to separate and count nuclei | ImageJ |