Swate template MetaboLights - Mass spectrometry
Metabolomics, Mass Spectrometry, metabolite
v1.0.4 released on 02/13/2026
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Template Content
Building Blocks + example values
| Input [Sample Name] | Parameter [mass spectrometry protocol] | Term Source REF (DPBO:0000188) | Term Accession Number (DPBO:0000188) | Parameter [scan polarity] | Term Source REF (MS:1000465) | Term Accession Number (MS:1000465) | Parameter [m/z acquisition range] | Term Source REF (MS:4000069) | Term Accession Number (MS:4000069) | Component [instrument] | Term Source REF (MS:1000463) | Term Accession Number (MS:1000463) | Parameter [ion source] | Term Source REF (OBI:0000361) | Term Accession Number (OBI:0000361) | Parameter [mass analyzer] | Term Source REF (MS:1000451) | Term Accession Number (MS:1000451) | Output [Data] | Data Format | Data Selector Format |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Mass Spectrometry | NCIT | https://bioregistry.io/NCIT:C17156 | positive scan | MS | https://www.ebi.ac.uk/ols4/ontologies/ms/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FMS_1000130 | 100-1000 | Bruker micrOTOF-Q II | electrospray ionization | MS | https://www.ebi.ac.uk/ols4/ontologies/ms/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FMS_1000073 | triple quadrupole |