Swate template Next generation sequencing
Next Generation Sequencing, assay
v1.0.3 released on 01/01/0001
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Protocol Type | Term Source REF (DPBO:1000161) | Term Accession Number (DPBO:1000161) | Parameter [library layout] | Term Source REF (DPBO:0000015) | Term Accession Number (DPBO:0000015) | Parameter [library strategy] | Term Source REF (DPBO:0000035) | Term Accession Number (DPBO:0000035) | Component [library preparation kit] | Term Source REF (GENEPIO:0000085) | Term Accession Number (GENEPIO:0000085) | Component [next generation sequencing instrument model] | Term Source REF (DPBO:0000040) | Term Accession Number (DPBO:0000040) | Output [Data] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| assay protocol | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_1000177 | single-end | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000086 | RNA-Seq | EFO | https://bioregistry.io/EFO:0008896 | TruSeq RNA Sample Prep Kit v2 | Illumina HiSeq 4000 | EFO | https://bioregistry.io/EFO:0008563 |