Swate template MPIMP - Fernie, chromatography
v1.0.1 released on 01/01/0001
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Protocol Type | Term Source REF (DPBO:1000161) | Term Accession Number (DPBO:1000161) | Protocol REF | Characteristic [sample type] | Term Source REF (DPBO:0000064) | Term Accession Number (DPBO:0000064) | Parameter [polarity] | Term Source REF (PATO:0002186) | Term Accession Number (PATO:0002186) | Parameter [chromatography] | Term Source REF (MS:1000054) | Term Accession Number (MS:1000054) | Parameter [MS sample post-extraction] | Term Source REF (DPBO:0000043) | Term Accession Number (DPBO:0000043) | Parameter [open split] | Term Source REF (MS:1000065) | Term Accession Number (MS:1000065) | Parameter [chromatography injection volume] | Unit | Term Source REF (DPBO:0010014) | Term Accession Number (DPBO:0010014) | Parameter [Batch] | Term Source REF (NCIT:C67073) | Term Accession Number (NCIT:C67073) | Parameter [Order] | Term Source REF (NCIT:C42680) | Term Accession Number (NCIT:C42680) | Output [Sample Name] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chromatography | NCIT | https://bioregistry.io/NCIT:C16431 | chromatography.txt | sample | MS | https://www.ebi.ac.uk/ols4/ontologies/ms/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FMS_1000457 | polar polarity | PATO | https://bioregistry.io/PATO:0002187 | Gas Chromatography | NCIT | https://bioregistry.io/NCIT:C30014 | MS derivatization | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000052 | open | PATO | https://bioregistry.io/PATO:0000610 | 1 | 1230_rA | 1 | |||||||||
| Chromatography | NCIT | https://bioregistry.io/NCIT:C16431 | chromatography.txt | Pooled Sample | NCIT | https://bioregistry.io/NCIT:C165587 | polar polarity | PATO | https://bioregistry.io/PATO:0002187 | Liquid Chromatography | NCIT | https://bioregistry.io/NCIT:C16435 | MS sample resuspension | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000044 | closed | PATO | https://bioregistry.io/PATO:0000608 | 2 | 2 | 2 | |||||||||
| Chromatography | NCIT | https://bioregistry.io/NCIT:C16431 | chromatography.txt | standard | MS | https://www.ebi.ac.uk/ols4/ontologies/ms/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FMS_1000898 | nonpolar polarity | PATO | https://bioregistry.io/PATO:0002188 | High Performance Liquid Chromatography | NCIT | https://bioregistry.io/NCIT:C16434 | MS sample resuspension | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000044 | 20 | A | 3 | ||||||||||||
| Chromatography | NCIT | https://bioregistry.io/NCIT:C16431 | chromatography.txt | blank sample | NCBITaxon | http://purl.obolibrary.org/obo/NCBITaxon_2582415 | nonpolar polarity | PATO | https://bioregistry.io/PATO:0002188 | Liquid Chromatography | NCIT | https://bioregistry.io/NCIT:C16435 | MS sample resuspension | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_0000044 | 2 | Batch1 | 4 |
Release Notes
Currently Work in Progress 🚧Versions
| Version | Name | Release on |
| 1.0.1 | MPIMP - Fernie, chromatography | 01/01/0001 |