Swate template Metabolomics computational analysis
Metabolomics, Mass Spectrometry, Data Processing
v1.1.8 released on 01/01/0001
by Dominik Brilhaus, Oliver Maus, Martin Kuhl
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Protocol Type | Term Source REF (DPBO:1000161) | Term Accession Number (DPBO:1000161) | Parameter [area normalization] | Term Source REF (MS:1001999) | Term Accession Number (MS:1001999) | Parameter [data transformation] | Term Source REF (MS:1000452) | Term Accession Number (MS:1000452) | Parameter [metabolite assignment file] | Term Source REF (DPBO:0000077) | Term Accession Number (DPBO:0000077) | Parameter [processed data file format] | Term Source REF (DPBO:0000027) | Term Accession Number (DPBO:0000027) | Output [Data] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| data processing protocol | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_1000178 | normalized to ribitol and sample weight | user-specific | baseline-correction via MetAlign | user-specific | *_maf.tsv | user-specific | *.mzXML | user-specific | ||||||
| data processing protocol | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_1000178 | *.mzML | user-specific | ||||||||||||
| data processing protocol | DPBO | http://purl.org/nfdi4plants/ontology/dpbo/DPBO_1000178 | *.mzData | user-specific |