Swate template Metagenomics - Re-analysis
v1.0.1 released on 01/01/0001
by Angela Kranz
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Characteristic [Publication Title] | Term Source REF (NCIT:C183337) | Term Accession Number (NCIT:C183337) | Characteristic [Digital Object Identifier] | Term Source REF (NCIT:C71462) | Term Accession Number (NCIT:C71462) | Characteristic [SRA accession field] | Term Source REF (GENEPIO:0001142) | Term Accession Number (GENEPIO:0001142) | Characteristic [MG-RAST accession number field] | Term Source REF (DPBO:1000233) | Term Accession Number (DPBO:1000233) | Characteristic [organism] | Term Source REF (OBI:0100026) | Term Accession Number (OBI:0100026) | Characteristic [Collection Date] | Term Source REF (NCIT:C81286) | Term Accession Number (NCIT:C81286) | Characteristic [biome] | Term Source REF (ENVO:00000428) | Term Accession Number (ENVO:00000428) | Characteristic [environment (feature)] | Term Source REF (DPBO:0002008) | Term Accession Number (DPBO:0002008) | Characteristic [environmental material] | Term Source REF (ENVO:00010483) | Term Accession Number (ENVO:00010483) | Characteristic [geographic location] | Term Source REF (GAZ:00000448) | Term Accession Number (GAZ:00000448) | Characteristic [GPS coordinates] | Term Source REF (AGRO:00000572) | Term Accession Number (AGRO:00000572) | Characteristic [Sampling depth] | Unit | Term Source REF (DPBO:0000113) | Term Accession Number (DPBO:0000113) | Output [Sample Name] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| The Microbiome of Brazilian Mangrove Sediments as Revealed by Metagenomics | 10.1371/journal.pone.0038600 | mgm4451033.3 | mangrove metagenome | NCBITaxon | http://purl.obolibrary.org/obo/NCBITaxon_1284368 | 2011-08-20 | mangrove biome | ENVO | https://bioregistry.io/ENVO:01000181 | tropical mangrove | ENVO | https://bioregistry.io/ENVO:01000403 | estuarine mud | ENVO | https://bioregistry.io/ENVO:00002160 | Brazil | NCIT | https://bioregistry.io/NCIT:C16364 | 14° 14´6.0144"S, 51°55´31.0152"W | 0.3 | meter | UO | https://bioregistry.io/UO:0000008 |