Swate template ENA - Plant sample - extension
Plant, sample, nucleotide, Sequencing Data, Genomics, Transcriptomics
v1.0.3 released on 01/01/0001
by Stella Eggels, Xiaoran Zhou
145 Downloads
Template Content
Building Blocks + example values
| Input [Source Name] | Characteristic [reproductive process] | Term Source REF (GO:0022414) | Term Accession Number (GO:0022414) | Parameter [soil] | Term Source REF (ENVO:00001998) | Term Accession Number (ENVO:00001998) | Parameter [Soil pH] | Term Source REF (MIAPPE:0124) | Term Accession Number (MIAPPE:0124) | Parameter [Growth facility] | Term Source REF (MIAPPE:0095) | Term Accession Number (MIAPPE:0095) | Characteristic [plant health state] | Term Source REF (DPBO:0000034) | Term Accession Number (DPBO:0000034) | Characteristic [plant disease] | Term Source REF (PSO:0000013) | Term Accession Number (PSO:0000013) | Characteristic [Ploidy] | Term Source REF (NCIT:C17001) | Term Accession Number (NCIT:C17001) | Characteristic [number of chromosomes] | Term Source REF (DPBO:0000031) | Term Accession Number (DPBO:0000031) | Characteristic [estimated genome size] | Term Source REF (DPBO:0000032) | Term Accession Number (DPBO:0000032) | Characteristic [common name of organism] | Term Source REF (OBI:0003074) | Term Accession Number (OBI:0003074) | Characteristic [subspecific taxonomic rank] | Term Source REF (DPBO:0000037) | Term Accession Number (DPBO:0000037) | Characteristic [Infraspecific name] | Term Source REF (MIAPPE:0044) | Term Accession Number (MIAPPE:0044) | Parameter [Rooting condition] | Term Source REF (MIAPPE:0115) | Term Accession Number (MIAPPE:0115) | Parameter [Rooting medium] | Term Source REF (MIAPPE:0116) | Term Accession Number (MIAPPE:0116) | Parameter [rooting medium macronutrients] | Term Source REF (DPBO:0000039) | Term Accession Number (DPBO:0000039) | Parameter [rooting medium micronutrients] | Term Source REF (DPBO:0000055) | Term Accession Number (DPBO:0000055) | Parameter [rooting medium organic supplements] | Term Source REF (DPBO:0000058) | Term Accession Number (DPBO:0000058) | Parameter [rooting medium carbon] | Term Source REF (DPBO:0000065) | Term Accession Number (DPBO:0000065) | Parameter [rooting medium regulators] | Term Source REF (DPBO:0000066) | Term Accession Number (DPBO:0000066) | Parameter [rooting medium solidifier] | Term Source REF (DPBO:0000067) | Term Accession Number (DPBO:0000067) | Parameter [rooting medium pH] | Term Source REF (DPBO:0000038) | Term Accession Number (DPBO:0000038) | Parameter [Air temperature] | Term Source REF (MIAPPE:0096) | Term Accession Number (MIAPPE:0096) | Parameter [plant nutrient treatment] | Term Source REF (EO:0007241) | Term Accession Number (EO:0007241) | Parameter [watering exposure] | Term Source REF (PECO:0007383) | Term Accession Number (PECO:0007383) | Parameter [plant treatment] | Term Source REF (EO:0001001) | Term Accession Number (EO:0001001) | Parameter [light regimen] | Term Source REF (EO:0007196) | Term Accession Number (EO:0007196) | Output [Sample Name] |
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| Input1 | sexual reproduction | GO | https://bioregistry.io/GO:0019953 | fluvisol | ENVO | https://bioregistry.io/ENVO:00002273 | 5.2 | field | Diseased | NCIT | https://bioregistry.io/NCIT:C175249 | Cercospora zeae-maydis | diploid | PATO | https://bioregistry.io/PATO:0001394 | 10 | 2.4 Gb | maize | cultivar | EFO | https://bioregistry.io/EFO:0005136 | B73 | 10 plants per 2 m row | soil | ENVO | https://bioregistry.io/ENVO:00001998 | KH2PO4 (170mg/L) | H3BO3 (6.2mg/L) | Nicotinic acid (0.5mg/L) | sucrose | CHEBI | https://bioregistry.io/CHEBI:17992 | 0.5mg/L NAA | agar | CHEBI | https://bioregistry.io/CHEBI:2509 | 5.2 | 25 °C day, 18°C night | 40 kg P2O5 per hectar | rain-fed | drought environment | EO | http://purl.obolibrary.org/obo/EO_0007404 | 1000 µmol m-2 s-1, 16 h | sample1 |