Swate template MibiNet microbial cultivation conditions
v1.0.1 released on 01/01/0001
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Template Content
Building Blocks + example values
| Input [Sample Name] | Protocol REF | Characteristic [Organism] | Term Source REF (MIAPPE:0041) | Term Accession Number (MIAPPE:0041) | Characteristic [Biological replicate] | Term Source REF (NFDI4PSO:0000042) | Term Accession Number (NFDI4PSO:0000042) | Component [cultivation device] | Term Source REF () | Term Accession Number () | Parameter [cultivation container] | Term Source REF () | Term Accession Number () | Parameter [culture medium] | Term Source REF () | Term Accession Number () | Parameter [culture medium volume] | Unit | Term Source REF (DPBO:1000155) | Term Accession Number (DPBO:1000155) | Parameter [Inoculation] | Term Source REF (NCIT:C68774) | Term Accession Number (NCIT:C68774) | Parameter [growth time] | Unit | Term Source REF (DPBO:0000100) | Term Accession Number (DPBO:0000100) | Parameter [temperature] | Unit | Term Source REF (EFO:0001702) | Term Accession Number (EFO:0001702) | Parameter [Shake] | Unit | Term Source REF (NCIT:C64646) | Term Accession Number (NCIT:C64646) | Parameter [Comment] | Term Source REF (NCIT:C25393) | Term Accession Number (NCIT:C25393) | Output [Sample Name] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| WT | Cultivation_condition.md | Corynebacterium glutamicum | NCBITaxon | http://purl.obolibrary.org/obo/NCBITaxon_1718 | 3 | Thermo shaker | 96 well plate | BAO | http://purl.obolibrary.org/obo/BAO_0000513 | BHI | 1 | milliliter | UO | https://bioregistry.io/UO:0000098 | from plate | 8 | Hour | NCIT | https://bioregistry.io/NCIT:C25529 | 30 | Degree Celsius | NCIT | https://bioregistry.io/NCIT:C42559 | 900 | Revolution per Minute | NCIT | https://bioregistry.io/NCIT:C70469 | preculture_WT |