Swate template ENA - Single CDS annotated sequence
mandatory, Sequencing Data, Coding Region, Genomics, sequence annotation
v1.0.3 released on 01/01/0001
by Stella Eggels, Xiaoran Zhou
145 Downloads
Template Content
Building Blocks + example values
| Input [Data] | Characteristic [organism] | Term Source REF (OBI:0100026) | Term Accession Number (OBI:0100026) | Characteristic [Environmental DNA] | Term Source REF (NCIT:C169106) | Term Accession Number (NCIT:C169106) | Characteristic [gene symbol] | Term Source REF (GENEPIO:0100598) | Term Accession Number (GENEPIO:0100598) | Characteristic [gene product] | Term Source REF (MI:0251) | Term Accession Number (MI:0251) | Characteristic [translation table] | Term Source REF (MS:1001025) | Term Accession Number (MS:1001025) | Characteristic [coding_start] | Term Source REF (SO:0000323) | Term Accession Number (SO:0000323) | Characteristic [coding_end] | Term Source REF (SO:0000327) | Term Accession Number (SO:0000327) | Characteristic [5' partial CDS] | Term Source REF (DPBO:0000070) | Term Accession Number (DPBO:0000070) | Characteristic [3' partial CDS] | Term Source REF (DPBO:0000071) | Term Accession Number (DPBO:0000071) | Characteristic [nucleic acid sequence] | Term Source REF (SIO:010016) | Term Accession Number (SIO:010016) | Output [Data] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Zea mays | NCBITaxon | http://purl.obolibrary.org/obo/NCBITaxon_4577 | No | NCIT | https://bioregistry.io/NCIT:C49487 | RdRp | RNA-dependent RNA polymerase activity | GO | https://bioregistry.io/GO:0003968 | 1 | 1 | 3600 | No | NCIT | https://bioregistry.io/NCIT:C49487 | No | NCIT | https://bioregistry.io/NCIT:C49487 |